Courses
16SrRNA Microbiome Intermediate Bioinformatics Training
Material type: Assignments , Exercises , Lecture notes , Slides , Tutorial , VideosCourse Level: Intermediate
Submitted by Dr Verena Ras -
Year created: 2019
Year latest update: 2019
Description:
The H3ABioNet 16S rRNA Microbiome Intermediate Bioinformatics course provided training to enable participants to gain the knowledge and skills to perform 16S rRNA microbiome data analyses using a variety of bioinformatics methods and tools. The H3ABioNet 16S rRNA Microbiome Intermediate Bioinformatics course used a blended learning approach…
Genome Wide Association Studies, Quality Control and Family based analysis
Material type: Assignments , Exercises , Slides , SolutionsCourse Level: Intermediate
Submitted by Dr Verena Ras -
Year created: 2017
Year latest update: 2017
Description:
The post-genomic era has been characterized by the rapid advance of genotyping technology resulting in a wealth of new, high-quality data that may hold promise for the further elucidation of genetic factors underlying complex disease. Without the proper tools and methods, the ultimate utility of such rich data may be limited in scope as the field…
H3ABioNet Data Support Workshop - 8th H3Africa Meeting
Material type: SlidesCourse Level: Intermediate
Submitted by Dr Verena Ras -
Year created: 2016
Year latest update: 2016
Description:
This interactive workshop will provide an overview of data management, analysis and submission for H3Africa projects. It also provides an opportunity for Data Support Working Group members, who represent the H3Africa projects to engage with H3ABioNet and discuss their needs.
Medical population genetics and GWAS for complex diseases 19th April - 24th April, 2015
Material type: Exercises , Slides , TutorialCourse Level: Intermediate
Submitted by Dr Verena Ras -
Year created: 2015
Year latest update: 2014
Description:
The workshop was split into two tracks:
1) An introductory track that will cover fundamental assumptions, showcase recent successes and discuss limitations of current GWAS approaches in the field of complex diseases, particularly in the case of African populations with known low linkage disequilibrium (LD). It will also provide a ‘…
NMIMR H3ABioNet Intermediate Bioinformatics Workshop 7th to 11th July, 2014
Material type: Exercises , Slides , SolutionsCourse Level: Intermediate
Submitted by Dr Verena Ras -
Year created: 2013
Year latest update: 2014
Description:
This Intermediate Bioinformatics Workshop will strengthen and expand on some relevant tools in Bioinformatics and Computational Biology. It will also serve as a refresher for trainees of the previous workshop enabling a better integration of Bioinformatics into their on-going research and teaching. This workshop will prepare participants…
Covenant University GWAS workshop for complex diseases 2015
Material type: Assignments , Exercises , Slides , TutorialCourse Level: Intermediate
Submitted by Dr Verena Ras -
Year created: 2015
Year latest update: 2015
Description:
This workshop provides an overview of medical population genetics, PLINK and basic statistics and practicals in order to build a foundational knowledgebase for genome wide association testing. The workshop will consist of a series of theory lectures and a “hands on” practical lab session at the end.
Analysing the Microbiome 29th to 31st March 2017
Material type: Exercises , TutorialCourse Level: Intermediate
Submitted by Dr Verena Ras -
Year created: 2017
Year latest update: 2016
Description:
The development of next generation sequence technology has led to rapid advances in microbiome study. The Sydney Brenner Institute for Molecular Bioscience with support from the Pan-African Bioinformatics Network for H3Africa will be offering a short-course on the bioinformatics of analysing the microbiome. The course will give an overview of…
EMBO Practical Course on Computational analysis of protein-protein interactions: From sequences to networks.
Module: PPI resources; Scoring & filtering; Network construction; Functional enrichment; Visualization; Case studies
Material type: Exercises
, Slides
, Tutorial
Course Level: Intermediate
Submitted by Dr Verena Ras
-
Year created: 2014
Year latest update: 2014
Description:
EMBO Practical Course on Computational analysis of protein-protein interactions: From sequences to networks
Prerequisites:
- Software list to install prior to starting training: https://training.h3abionet.org/embo_workshop_2014/?page_id=100.
Introduction to Algorithms (2011)
Material type: Assignments , Exams , Solutions , VideosCourse Level: Intermediate
Submitted by Mr Jean Safari -
Year created: 2011
Year latest update: N/A
Description:
Introduction to mathematical modeling of computational problems with a focus on algorithms, algorithm paradigms and data structures used to solve these problems
Microbial Genomics and Genetics
Material type: VideosCourse Level: Intermediate
Submitted by Mr Jean Safari -
Year created: N/A
Year latest update: N/A
Description:
Provides basics on bacterial and archaeal genetics. You need Flash player 8+ and JavaScript enabled to view this video.