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Introduction to multiple sequence alignments

Module: N/A
Material type: Lectures , Notes
Course Level: Basic
Submitted by Mr Jean Safari -
Description:
An introduction to multiple sequence alignments(MSAs) for biologists with a focus of protein alignments. Description of methods to build MSAs as well as the interpretation of MSAs(structural and evolutionary). Includes an introduction to JalView which is used for the visualisation and manipulation of MSAs
Classification: N/A

Summarising sets of phylogenies

Module: N/A
Material type: Lectures , Notes
Course Level: Basic , Intermediate
Submitted by Mr Jean Safari -
Description:
Basic introduction to concepts associated with methods used to summarise sets of phylogenies - emphasis on consensus trees and split networks
Classification: N/A

Biology

Module: N/A
Material type: Videos
Course Level: Basic
Submitted by Mr Jean Safari -
Description:
Series of 30 lectures on basic biology
Classification: N/A

Human Behavioural Physiology

Module: N/A
Material type: Videos
Course Level: Basic
Submitted by Mr Jean Safari -
Description:
Basics in molecular biology with about 36 lectures. Important to note that there are several lectures which seem irrelevant to bioinformatics but relevant nonetheless
Classification: N/A

Biochemistry

Module: N/A
Material type: Videos
Course Level: Basic
Submitted by Mr Jean Safari -
Description:
Basics in biomolecules, course covers proteins, carbohydrates and other structures. There are 19 lectures to view.
Classification: N/A

General Biochemistry

Module: N/A
Material type: Videos
Course Level: Basic
Submitted by Mr Jean Safari -
Description:
Basics in biochemistry
Classification: N/A

Informatics for RNA-sequence Analysis (2013)

Module: N/A
Material type: Videos , Lectures , Notes
Course Level: Basic
Submitted by Mr Jean Safari -
Description:
Introduction to RNA-seq data analysis with tutorials using some of the commonly used tools for RNA-seq data analysis
Classification: N/A

Pathway and Network Analysis of -omics Data (2013)

Module: N/A
Material type: Videos , Lectures , Notes
Course Level: Basic
Submitted by Mr Jean Safari -
Description:
Examination of the bioinformatics concepts and tools available for annotating and determining functional enrichment of gene lists and analysing networks
Classification: N/A

Flow Cytometry Data Analysis using R (2013)

Module: N/A
Material type: Videos , Lectures , Notes
Course Level: Basic
Submitted by Mr Jean Safari -
Description:
Course introduces the use of R software to analyse and visualise Flow Cytometry (FCM) data.
Classification: N/A

Microarray Data Analysis (2013)

Module: N/A
Material type: Videos , Lectures , Notes
Course Level: Basic
Submitted by Mr Jean Safari -
Description:
Methods and analysis workflows for analysing gene expression microarray datasets including discussion of concepts such as data-organisation practices, data annotation, normalisation, pre-processing and downstream analysis.
Classification: N/A